Resources
Protocols
-
Patterning recipes
Current patterning recipes used by the Brain Organoid Hub to make cortical, subpallial and spinal cord organoids.
-
Protocols and videos
Find protocols for hiPSC thawing, passaging and cryopreservation, and organoid formation along with video demonstrations in our Brain Organoid Hub website.
Datasets
-
devspinalcord
Data browser for single cell and single nucleus RNAseq from GW17-18 human spinal cord. See Andersen et al 2023, Nature Neuroscience for more details. See GEO: GSE188516 for downloads.
-
scbrainregulation
Data browser for single cell RNAseq and ATACseq of PCW16-23 human cerebral cortex. See Trevino et al 2021, Cell for more details. See GEO: GSE162170 for downloads.
-
GECO
Data browser for gene expression trajectories across the differentiation of human cortical organoids. See Gordon et al 2021, Nature Neuro for details. See GEO: GSE150122 and GSE150123 for downloads.
-
brainchromatin
Data browser for bulk RNAseq and ATACseq of hCS and hSS across differentiation. See Trevino et al 2020, Science for details. See GEO: GSE132403 for downloads.